Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trim38Q5SZ99 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trim38Q5SZ99 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trim38Q5SZ99 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim38Q5SZ99 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Gm18671-201ENSMUST00000214826 683 ntBASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim38Q5SZ99 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Gm10033-202ENSMUST00000211874 928 ntBASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim38Q5SZ99 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Gm5874-201ENSMUST00000096101 508 ntBASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trim38Q5SZ99 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.08■□□□□ 0.65
Trim38Q5SZ99 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms