Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav7d-4Q5R1H9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav7d-4Q5R1H9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7d-4Q5R1H9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7d-4Q5R1H9 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.08□□□□□ -0.15
Trav7d-4Q5R1H9 Gm45906-201ENSMUST00000208911 1430 ntBASIC14.08□□□□□ -0.15
Trav7d-4Q5R1H9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav7d-4Q5R1H9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav7d-4Q5R1H9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Gm9870-201ENSMUST00000063874 645 ntBASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav7d-4Q5R1H9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Gm12366-201ENSMUST00000121722 873 ntBASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav7d-4Q5R1H9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms