Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6-3Q5R1E6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-3Q5R1E6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-3Q5R1E6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-3Q5R1E6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-3Q5R1E6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-3Q5R1E6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6-3Q5R1E6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6-3Q5R1E6 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav6-3Q5R1E6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6-3Q5R1E6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms