Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col27a1Q5QNQ9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Gm7153-201ENSMUST00000117092 455 ntBASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col27a1Q5QNQ9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.05■□□□□ 0.48
Col27a1Q5QNQ9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col27a1Q5QNQ9 Gm17661-201ENSMUST00000170317 270 ntBASIC18.04■□□□□ 0.48
Col27a1Q5QNQ9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Col27a1Q5QNQ9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.04■□□□□ 0.48
Col27a1Q5QNQ9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col27a1Q5QNQ9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Col27a1Q5QNQ9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Col27a1Q5QNQ9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Col27a1Q5QNQ9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.03■□□□□ 0.48
Col27a1Q5QNQ9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col27a1Q5QNQ9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Col27a1Q5QNQ9 Gm17807-201ENSMUST00000186869 298 ntBASIC18.03■□□□□ 0.48
Col27a1Q5QNQ9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Col27a1Q5QNQ9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Mir5130-201ENSMUST00000175160 84 ntBASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Col27a1Q5QNQ9 Gm44771-201ENSMUST00000206975 626 ntBASIC18.02■□□□□ 0.47
Col27a1Q5QNQ9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Col27a1Q5QNQ9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col27a1Q5QNQ9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Col27a1Q5QNQ9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Col27a1Q5QNQ9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Gm22697-201ENSMUST00000175194 63 ntBASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Gm38027-201ENSMUST00000192315 235 ntBASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Col27a1Q5QNQ9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms