Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Trim41Q5NCC3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC32.18■■■□□ 2.74
Trim41Q5NCC3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC32.18■■■□□ 2.74
Trim41Q5NCC3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Trim41Q5NCC3 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Trim41Q5NCC3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Trim41Q5NCC3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Trim41Q5NCC3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Trim41Q5NCC3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Trim41Q5NCC3 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC32.17■■■□□ 2.74
Trim41Q5NCC3 AC133598.3-202ENSMUST00000224219 531 ntBASIC32.17■■■□□ 2.74
Trim41Q5NCC3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Trim41Q5NCC3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC32.17■■■□□ 2.74
Trim41Q5NCC3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Trim41Q5NCC3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Trim41Q5NCC3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
Trim41Q5NCC3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Gm8309-201ENSMUST00000206627 1448 ntBASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Trim41Q5NCC3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Trim41Q5NCC3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
Trim41Q5NCC3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Trim41Q5NCC3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Trim41Q5NCC3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC32.15■■■□□ 2.74
Trim41Q5NCC3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Trim41Q5NCC3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Trim41Q5NCC3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Trim41Q5NCC3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Trim41Q5NCC3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC32.15■■■□□ 2.74
Trim41Q5NCC3 Golph3-202ENSMUST00000226517 2359 ntBASIC32.14■■■□□ 2.74
Trim41Q5NCC3 Gm13158-201ENSMUST00000122007 736 ntBASIC32.14■■■□□ 2.74
Trim41Q5NCC3 H2-K2-201ENSMUST00000174250 1049 ntBASIC32.14■■■□□ 2.74
Trim41Q5NCC3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Trim41Q5NCC3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Trim41Q5NCC3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Trim41Q5NCC3 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC32.14■■■□□ 2.74
Trim41Q5NCC3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC32.14■■■□□ 2.74
Trim41Q5NCC3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Trim41Q5NCC3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Trim41Q5NCC3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
Trim41Q5NCC3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
Trim41Q5NCC3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC32.13■■■□□ 2.73
Trim41Q5NCC3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Trim41Q5NCC3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
Trim41Q5NCC3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Trim41Q5NCC3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC32.12■■■□□ 2.73
Trim41Q5NCC3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Trim41Q5NCC3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC32.12■■■□□ 2.73
Trim41Q5NCC3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC32.12■■■□□ 2.73
Trim41Q5NCC3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Trim41Q5NCC3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
Trim41Q5NCC3 Gm8668-201ENSMUST00000120559 1447 ntBASIC32.11■■■□□ 2.73
Trim41Q5NCC3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC32.11■■■□□ 2.73
Trim41Q5NCC3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
Trim41Q5NCC3 Mir5122-201ENSMUST00000175004 89 ntBASIC32.11■■■□□ 2.73
Trim41Q5NCC3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC32.11■■■□□ 2.73
Trim41Q5NCC3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Trim41Q5NCC3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Trim41Q5NCC3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Gm15378-201ENSMUST00000121894 207 ntBASIC32.1■■■□□ 2.73
Trim41Q5NCC3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Flg-201ENSMUST00000050758 1488 ntBASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
Trim41Q5NCC3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Trim41Q5NCC3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Trim41Q5NCC3 Gm44771-201ENSMUST00000206975 626 ntBASIC32.09■■■□□ 2.73
Trim41Q5NCC3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Trim41Q5NCC3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Trim41Q5NCC3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Trim41Q5NCC3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Trim41Q5NCC3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Trim41Q5NCC3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Trim41Q5NCC3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Trim41Q5NCC3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Trim41Q5NCC3 Gm11927-201ENSMUST00000118472 759 ntBASIC32.08■■■□□ 2.73
Trim41Q5NCC3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC32.08■■■□□ 2.73
Trim41Q5NCC3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Trim41Q5NCC3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC32.08■■■□□ 2.73
Trim41Q5NCC3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.73
Trim41Q5NCC3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC32.07■■■□□ 2.73
Trim41Q5NCC3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Trim41Q5NCC3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
Trim41Q5NCC3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
Trim41Q5NCC3 AC159205.3-201ENSMUST00000224614 874 ntBASIC32.07■■■□□ 2.72
Trim41Q5NCC3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms