Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps41Q5KU39 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps41Q5KU39 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Vps41Q5KU39 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps41Q5KU39 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps41Q5KU39 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps41Q5KU39 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps41Q5KU39 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps41Q5KU39 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Gm7860-201ENSMUST00000121190 879 ntBASIC19.25■□□□□ 0.67
Vps41Q5KU39 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.25■□□□□ 0.67
Vps41Q5KU39 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps41Q5KU39 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.24■□□□□ 0.67
Vps41Q5KU39 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.24■□□□□ 0.67
Vps41Q5KU39 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps41Q5KU39 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.23■□□□□ 0.67
Vps41Q5KU39 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Gm11421-201ENSMUST00000122124 294 ntBASIC19.23■□□□□ 0.67
Vps41Q5KU39 Gm21956-201ENSMUST00000179946 522 ntBASIC19.23■□□□□ 0.67
Vps41Q5KU39 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vps41Q5KU39 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps41Q5KU39 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps41Q5KU39 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.22■□□□□ 0.67
Vps41Q5KU39 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Vps41Q5KU39 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.22■□□□□ 0.67
Vps41Q5KU39 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Vps41Q5KU39 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Vps41Q5KU39 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps41Q5KU39 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps41Q5KU39 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps41Q5KU39 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps41Q5KU39 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Vps41Q5KU39 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps41Q5KU39 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.21■□□□□ 0.67
Vps41Q5KU39 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps41Q5KU39 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.21■□□□□ 0.67
Vps41Q5KU39 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.21■□□□□ 0.67
Vps41Q5KU39 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps41Q5KU39 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Vps41Q5KU39 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Vps41Q5KU39 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Smad6-203ENSMUST00000179458 273 ntBASIC19.2■□□□□ 0.66
Vps41Q5KU39 Mir7075-201ENSMUST00000184187 82 ntBASIC19.2■□□□□ 0.66
Vps41Q5KU39 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.2■□□□□ 0.66
Vps41Q5KU39 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.2■□□□□ 0.66
Vps41Q5KU39 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vps41Q5KU39 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Vps41Q5KU39 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.19■□□□□ 0.66
Vps41Q5KU39 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Vps41Q5KU39 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms