Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tmem40Q4FJU9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.68■□□□□ 0.1
Tmem40Q4FJU9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 BC021767-201ENSMUST00000126387 1716 ntBASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tmem40Q4FJU9 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Tmem40Q4FJU9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Gm6576-201ENSMUST00000169678 883 ntBASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Tmem40Q4FJU9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
Tmem40Q4FJU9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Gm5643-201ENSMUST00000117081 966 ntBASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Gm2559-201ENSMUST00000201323 363 ntBASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tmem40Q4FJU9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Gm13836-201ENSMUST00000121159 501 ntBASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tmem40Q4FJU9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms