Protein–RNA interactions for Protein: Q3UW98

Clca4b, Chloride channel accessory 4B, mousemouse

Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca4bQ3UW98 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clca4bQ3UW98 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clca4bQ3UW98 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clca4bQ3UW98 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.84■□□□□ 0.45
Clca4bQ3UW98 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clca4bQ3UW98 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clca4bQ3UW98 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Mir5133-201ENSMUST00000174955 77 ntBASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clca4bQ3UW98 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.82■□□□□ 0.44
Clca4bQ3UW98 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Clca4bQ3UW98 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Gm12527-201ENSMUST00000117967 564 ntBASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Gm7514-201ENSMUST00000209475 934 ntBASIC17.8■□□□□ 0.44
Clca4bQ3UW98 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Reep4-203ENSMUST00000226563 1444 ntBASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clca4bQ3UW98 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Gm7977-201ENSMUST00000193787 748 ntBASIC17.79■□□□□ 0.44
Clca4bQ3UW98 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Clca4bQ3UW98 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Clca4bQ3UW98 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.78■□□□□ 0.44
Clca4bQ3UW98 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms