Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Arhgef40Q3UPH7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC27.46■■□□□ 1.99
Arhgef40Q3UPH7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC27.46■■□□□ 1.99
Arhgef40Q3UPH7 Arhgef4-208ENSMUST00000211073 171 ntBASIC27.46■■□□□ 1.99
Arhgef40Q3UPH7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Arhgef40Q3UPH7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC27.46■■□□□ 1.99
Arhgef40Q3UPH7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Arhgef40Q3UPH7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Arhgef40Q3UPH7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC27.45■■□□□ 1.99
Arhgef40Q3UPH7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Arhgef40Q3UPH7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Arhgef40Q3UPH7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Arhgef40Q3UPH7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Arhgef40Q3UPH7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Arhgef40Q3UPH7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC27.44■■□□□ 1.98
Arhgef40Q3UPH7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC27.44■■□□□ 1.98
Arhgef40Q3UPH7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC27.44■■□□□ 1.98
Arhgef40Q3UPH7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC27.44■■□□□ 1.98
Arhgef40Q3UPH7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Arhgef40Q3UPH7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Arhgef40Q3UPH7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Arhgef40Q3UPH7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Arhgef40Q3UPH7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Arhgef40Q3UPH7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
Arhgef40Q3UPH7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Arhgef40Q3UPH7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Arhgef40Q3UPH7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Arhgef40Q3UPH7 Gm3375-201ENSMUST00000203929 796 ntBASIC27.43■■□□□ 1.98
Arhgef40Q3UPH7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Arhgef40Q3UPH7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Arhgef40Q3UPH7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC27.42■■□□□ 1.98
Arhgef40Q3UPH7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Arhgef40Q3UPH7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
Arhgef40Q3UPH7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Arhgef40Q3UPH7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
Arhgef40Q3UPH7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Arhgef40Q3UPH7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Arhgef40Q3UPH7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Arhgef40Q3UPH7 Gm10459-201ENSMUST00000202708 1155 ntBASIC27.41■■□□□ 1.98
Arhgef40Q3UPH7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Arhgef40Q3UPH7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Arhgef40Q3UPH7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
Arhgef40Q3UPH7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Arhgef40Q3UPH7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Arhgef40Q3UPH7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Arhgef40Q3UPH7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Arhgef40Q3UPH7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Arhgef40Q3UPH7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC27.4■■□□□ 1.98
Arhgef40Q3UPH7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Arhgef40Q3UPH7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Arhgef40Q3UPH7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Arhgef40Q3UPH7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Arhgef40Q3UPH7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Arhgef40Q3UPH7 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Arhgef40Q3UPH7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Arhgef40Q3UPH7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
Arhgef40Q3UPH7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC27.39■■□□□ 1.98
Arhgef40Q3UPH7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Arhgef40Q3UPH7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Arhgef40Q3UPH7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Arhgef40Q3UPH7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
Arhgef40Q3UPH7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Arhgef40Q3UPH7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Arhgef40Q3UPH7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Arhgef40Q3UPH7 Gm15853-202ENSMUST00000195518 2041 ntBASIC27.38■■□□□ 1.97
Arhgef40Q3UPH7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Arhgef40Q3UPH7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
Arhgef40Q3UPH7 Gm21362-201ENSMUST00000194272 928 ntBASIC27.37■■□□□ 1.97
Arhgef40Q3UPH7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Arhgef40Q3UPH7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Arhgef40Q3UPH7 Gm44544-201ENSMUST00000207052 1844 ntBASIC27.37■■□□□ 1.97
Arhgef40Q3UPH7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Arhgef40Q3UPH7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Arhgef40Q3UPH7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Arhgef40Q3UPH7 Otx2os1-204ENSMUST00000227221 751 ntBASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Hsf1-204ENSMUST00000226872 2104 ntBASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
Arhgef40Q3UPH7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Arhgef40Q3UPH7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms