Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nlrc4Q3UP24 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nlrc4Q3UP24 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nlrc4Q3UP24 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nlrc4Q3UP24 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nlrc4Q3UP24 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nlrc4Q3UP24 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nlrc4Q3UP24 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nlrc4Q3UP24 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nlrc4Q3UP24 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nlrc4Q3UP24 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Gm4968-201ENSMUST00000071458 858 ntBASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nlrc4Q3UP24 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Gm5408-201ENSMUST00000197998 747 ntBASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nlrc4Q3UP24 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nlrc4Q3UP24 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Rab3c-203ENSMUST00000224180 967 ntBASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nlrc4Q3UP24 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nlrc4Q3UP24 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nlrc4Q3UP24 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nlrc4Q3UP24 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms