Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Fndc4Q3TR08 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Fst-202ENSMUST00000223640 2612 ntBASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Fndc4Q3TR08 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.71■□□□□ 0.1
Fndc4Q3TR08 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Fndc4Q3TR08 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
Fndc4Q3TR08 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Smad6-203ENSMUST00000179458 273 ntBASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.7■□□□□ 0.1
Fndc4Q3TR08 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Fndc4Q3TR08 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fndc4Q3TR08 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Gm43017-201ENSMUST00000198296 752 ntBASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.68■□□□□ 0.1
Fndc4Q3TR08 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.67■□□□□ 0.1
Fndc4Q3TR08 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fndc4Q3TR08 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fndc4Q3TR08 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Fndc4Q3TR08 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fndc4Q3TR08 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fndc4Q3TR08 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fndc4Q3TR08 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Fndc4Q3TR08 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Fndc4Q3TR08 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Fndc4Q3TR08 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.65■□□□□ 0.1
Fndc4Q3TR08 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fndc4Q3TR08 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.65■□□□□ 0.1
Fndc4Q3TR08 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fndc4Q3TR08 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fndc4Q3TR08 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Fndc4Q3TR08 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Fndc4Q3TR08 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms