Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cul4aQ3TCH7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cul4aQ3TCH7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Gm13146-201ENSMUST00000118508 780 ntBASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cul4aQ3TCH7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Gm43060-201ENSMUST00000200621 289 ntBASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cul4aQ3TCH7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cul4aQ3TCH7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.39■□□□□ 0.7
Cul4aQ3TCH7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cul4aQ3TCH7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Cul4aQ3TCH7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cul4aQ3TCH7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cul4aQ3TCH7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.37■□□□□ 0.69
Cul4aQ3TCH7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cul4aQ3TCH7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cul4aQ3TCH7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cul4aQ3TCH7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cul4aQ3TCH7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cul4aQ3TCH7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cul4aQ3TCH7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.36■□□□□ 0.69
Cul4aQ3TCH7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Cul4aQ3TCH7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cul4aQ3TCH7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cul4aQ3TCH7 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms