Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.82■□□□□ 0.12
Smn1P97801 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Smn1P97801 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smn1P97801 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.81■□□□□ 0.12
Smn1P97801 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smn1P97801 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smn1P97801 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smn1P97801 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.81■□□□□ 0.12
Smn1P97801 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.81■□□□□ 0.12
Smn1P97801 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smn1P97801 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smn1P97801 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smn1P97801 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smn1P97801 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smn1P97801 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smn1P97801 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smn1P97801 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.8■□□□□ 0.12
Smn1P97801 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smn1P97801 Gm7860-201ENSMUST00000121190 879 ntBASIC15.8■□□□□ 0.12
Smn1P97801 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
Smn1P97801 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smn1P97801 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smn1P97801 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smn1P97801 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smn1P97801 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smn1P97801 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.79■□□□□ 0.12
Smn1P97801 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.79■□□□□ 0.12
Smn1P97801 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Smn1P97801 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.79■□□□□ 0.12
Smn1P97801 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.79■□□□□ 0.12
Smn1P97801 Gm43137-201ENSMUST00000198052 594 ntBASIC15.79■□□□□ 0.12
Smn1P97801 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smn1P97801 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.79■□□□□ 0.12
Smn1P97801 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smn1P97801 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smn1P97801 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Smn1P97801 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.78■□□□□ 0.12
Smn1P97801 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smn1P97801 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smn1P97801 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Smn1P97801 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smn1P97801 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Smn1P97801 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Gm12251-201ENSMUST00000117893 792 ntBASIC15.77■□□□□ 0.12
Smn1P97801 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smn1P97801 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Smn1P97801 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.77■□□□□ 0.12
Smn1P97801 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.77■□□□□ 0.11
Smn1P97801 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smn1P97801 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smn1P97801 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms