Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim43bP86448 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.94■□□□□ 0.62
Trim43bP86448 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.94■□□□□ 0.62
Trim43bP86448 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Trim43bP86448 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim43bP86448 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim43bP86448 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim43bP86448 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim43bP86448 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
Trim43bP86448 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Trim43bP86448 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trim43bP86448 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim43bP86448 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim43bP86448 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.92■□□□□ 0.62
Trim43bP86448 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.92■□□□□ 0.62
Trim43bP86448 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.92■□□□□ 0.62
Trim43bP86448 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.92■□□□□ 0.62
Trim43bP86448 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43bP86448 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.91■□□□□ 0.62
Trim43bP86448 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Gm42778-201ENSMUST00000199644 553 ntBASIC18.91■□□□□ 0.62
Trim43bP86448 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43bP86448 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43bP86448 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43bP86448 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.9■□□□□ 0.62
Trim43bP86448 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trim43bP86448 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43bP86448 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43bP86448 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43bP86448 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43bP86448 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim43bP86448 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43bP86448 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trim43bP86448 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43bP86448 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Trim43bP86448 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43bP86448 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim43bP86448 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
Trim43bP86448 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43bP86448 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43bP86448 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43bP86448 Gm18671-201ENSMUST00000214826 683 ntBASIC18.89■□□□□ 0.61
Trim43bP86448 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43bP86448 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43bP86448 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43bP86448 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim43bP86448 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
Trim43bP86448 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43bP86448 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43bP86448 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43bP86448 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim43bP86448 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43bP86448 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43bP86448 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43bP86448 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43bP86448 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms