Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.96■□□□□ 0.63
Ybx1P62960 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ybx1P62960 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.96■□□□□ 0.63
Ybx1P62960 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ybx1P62960 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ybx1P62960 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ybx1P62960 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ybx1P62960 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ybx1P62960 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ybx1P62960 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ybx1P62960 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.95■□□□□ 0.62
Ybx1P62960 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ybx1P62960 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ybx1P62960 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ybx1P62960 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Ybx1P62960 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.95■□□□□ 0.62
Ybx1P62960 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.95■□□□□ 0.62
Ybx1P62960 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ybx1P62960 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.95■□□□□ 0.62
Ybx1P62960 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ybx1P62960 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ybx1P62960 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.94■□□□□ 0.62
Ybx1P62960 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ybx1P62960 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.93■□□□□ 0.62
Ybx1P62960 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ybx1P62960 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ybx1P62960 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.93■□□□□ 0.62
Ybx1P62960 Gm11927-201ENSMUST00000118472 759 ntBASIC18.93■□□□□ 0.62
Ybx1P62960 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.93■□□□□ 0.62
Ybx1P62960 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ybx1P62960 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ybx1P62960 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ybx1P62960 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.92■□□□□ 0.62
Ybx1P62960 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ybx1P62960 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ybx1P62960 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.92■□□□□ 0.62
Ybx1P62960 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ybx1P62960 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ybx1P62960 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ybx1P62960 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.92■□□□□ 0.62
Ybx1P62960 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ybx1P62960 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ybx1P62960 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ybx1P62960 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ybx1P62960 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ybx1P62960 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ybx1P62960 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ybx1P62960 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ybx1P62960 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.91■□□□□ 0.62
Ybx1P62960 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ybx1P62960 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ybx1P62960 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ybx1P62960 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ybx1P62960 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ybx1P62960 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ybx1P62960 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ybx1P62960 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Ybx1P62960 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ybx1P62960 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ybx1P62960 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ybx1P62960 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ybx1P62960 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ybx1P62960 Golph3-205ENSMUST00000228671 2842 ntBASIC18.9■□□□□ 0.62
Ybx1P62960 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ybx1P62960 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ybx1P62960 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ybx1P62960 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ybx1P62960 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ybx1P62960 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ybx1P62960 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ybx1P62960 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ybx1P62960 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ybx1P62960 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ybx1P62960 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms