Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup43P59235 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup43P59235 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Nup43P59235 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.44■□□□□ 0.38
Nup43P59235 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nup43P59235 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Nup43P59235 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.44■□□□□ 0.38
Nup43P59235 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nup43P59235 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.44■□□□□ 0.38
Nup43P59235 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.44■□□□□ 0.38
Nup43P59235 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.44■□□□□ 0.38
Nup43P59235 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.44■□□□□ 0.38
Nup43P59235 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.44■□□□□ 0.38
Nup43P59235 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.44■□□□□ 0.38
Nup43P59235 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Nup43P59235 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup43P59235 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.43■□□□□ 0.38
Nup43P59235 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup43P59235 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup43P59235 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup43P59235 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup43P59235 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nup43P59235 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nup43P59235 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nup43P59235 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup43P59235 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nup43P59235 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Nup43P59235 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.42■□□□□ 0.38
Nup43P59235 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nup43P59235 Gm6211-202ENSMUST00000167849 925 ntBASIC17.42■□□□□ 0.38
Nup43P59235 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup43P59235 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup43P59235 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nup43P59235 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nup43P59235 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nup43P59235 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Nup43P59235 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nup43P59235 Gm10602-201ENSMUST00000098239 609 ntBASIC17.41■□□□□ 0.38
Nup43P59235 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.41■□□□□ 0.38
Nup43P59235 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Nup43P59235 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nup43P59235 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.4■□□□□ 0.38
Nup43P59235 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.4■□□□□ 0.38
Nup43P59235 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Nup43P59235 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup43P59235 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.4■□□□□ 0.38
Nup43P59235 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.4■□□□□ 0.38
Nup43P59235 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.4■□□□□ 0.38
Nup43P59235 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.4■□□□□ 0.38
Nup43P59235 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.4■□□□□ 0.38
Nup43P59235 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nup43P59235 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup43P59235 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup43P59235 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup43P59235 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup43P59235 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nup43P59235 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.4■□□□□ 0.38
Nup43P59235 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms