Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Gm13534-201ENSMUST00000121169 513 ntBASIC18.85■□□□□ 0.61
Tubgcp3P58854 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tubgcp3P58854 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Tubgcp3P58854 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.84■□□□□ 0.61
Tubgcp3P58854 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.84■□□□□ 0.61
Tubgcp3P58854 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tubgcp3P58854 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubgcp3P58854 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubgcp3P58854 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tubgcp3P58854 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp3P58854 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.83■□□□□ 0.6
Tubgcp3P58854 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tubgcp3P58854 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tubgcp3P58854 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp3P58854 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tubgcp3P58854 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tubgcp3P58854 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tubgcp3P58854 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.79■□□□□ 0.6
Tubgcp3P58854 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms