Protein–RNA interactions for Protein: P58242

Smpdl3b, Acid sphingomyelinase-like phosphodiesterase 3b, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpdl3bP58242 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smpdl3bP58242 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.71■□□□□ 0.59
Smpdl3bP58242 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Smpdl3bP58242 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpdl3bP58242 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpdl3bP58242 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpdl3bP58242 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smpdl3bP58242 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpdl3bP58242 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpdl3bP58242 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.7■□□□□ 0.58
Smpdl3bP58242 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpdl3bP58242 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smpdl3bP58242 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.7■□□□□ 0.58
Smpdl3bP58242 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpdl3bP58242 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smpdl3bP58242 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.7■□□□□ 0.58
Smpdl3bP58242 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Smpdl3bP58242 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Smpdl3bP58242 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpdl3bP58242 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.69■□□□□ 0.58
Smpdl3bP58242 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpdl3bP58242 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpdl3bP58242 Gm5408-201ENSMUST00000197998 747 ntBASIC18.69■□□□□ 0.58
Smpdl3bP58242 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpdl3bP58242 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smpdl3bP58242 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.68■□□□□ 0.58
Smpdl3bP58242 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.68■□□□□ 0.58
Smpdl3bP58242 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpdl3bP58242 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smpdl3bP58242 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpdl3bP58242 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Smpdl3bP58242 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpdl3bP58242 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpdl3bP58242 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.68■□□□□ 0.58
Smpdl3bP58242 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.68■□□□□ 0.58
Smpdl3bP58242 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Smpdl3bP58242 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpdl3bP58242 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpdl3bP58242 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpdl3bP58242 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.68■□□□□ 0.58
Smpdl3bP58242 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smpdl3bP58242 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smpdl3bP58242 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smpdl3bP58242 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smpdl3bP58242 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.66■□□□□ 0.58
Smpdl3bP58242 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smpdl3bP58242 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.66■□□□□ 0.58
Smpdl3bP58242 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smpdl3bP58242 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Smpdl3bP58242 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smpdl3bP58242 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.66■□□□□ 0.58
Smpdl3bP58242 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.66■□□□□ 0.58
Smpdl3bP58242 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Smpdl3bP58242 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.65■□□□□ 0.58
Smpdl3bP58242 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.65■□□□□ 0.58
Smpdl3bP58242 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.65■□□□□ 0.58
Smpdl3bP58242 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smpdl3bP58242 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smpdl3bP58242 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.64■□□□□ 0.57
Smpdl3bP58242 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms