Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Gm21956-201ENSMUST00000179946 522 ntBASIC20.85■□□□□ 0.93
Usp25P57080 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.85■□□□□ 0.93
Usp25P57080 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
Usp25P57080 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Usp25P57080 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Usp25P57080 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Usp25P57080 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.84■□□□□ 0.93
Usp25P57080 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.84■□□□□ 0.93
Usp25P57080 Spcs1-204ENSMUST00000226782 949 ntBASIC20.84■□□□□ 0.93
Usp25P57080 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Usp25P57080 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp25P57080 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.83■□□□□ 0.93
Usp25P57080 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Usp25P57080 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Usp25P57080 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.83■□□□□ 0.93
Usp25P57080 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.83■□□□□ 0.93
Usp25P57080 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp25P57080 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.83■□□□□ 0.93
Usp25P57080 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Usp25P57080 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.83■□□□□ 0.92
Usp25P57080 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp25P57080 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp25P57080 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Usp25P57080 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp25P57080 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp25P57080 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Usp25P57080 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp25P57080 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Usp25P57080 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Usp25P57080 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Usp25P57080 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp25P57080 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp25P57080 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp25P57080 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp25P57080 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp25P57080 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.82■□□□□ 0.92
Usp25P57080 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Usp25P57080 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp25P57080 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp25P57080 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.81■□□□□ 0.92
Usp25P57080 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp25P57080 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.81■□□□□ 0.92
Usp25P57080 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp25P57080 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Usp25P57080 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp25P57080 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Usp25P57080 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp25P57080 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Usp25P57080 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp25P57080 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Gm43137-201ENSMUST00000198052 594 ntBASIC20.8■□□□□ 0.92
Usp25P57080 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp25P57080 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Usp25P57080 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp25P57080 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp25P57080 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp25P57080 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.79■□□□□ 0.92
Usp25P57080 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp25P57080 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Usp25P57080 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.79■□□□□ 0.92
Usp25P57080 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp25P57080 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp25P57080 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp25P57080 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.79■□□□□ 0.92
Usp25P57080 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp25P57080 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms