Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ddx6P54823 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.8■□□□□ 0.6
Ddx6P54823 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ddx6P54823 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ddx6P54823 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx6P54823 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx6P54823 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ddx6P54823 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx6P54823 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx6P54823 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.79■□□□□ 0.6
Ddx6P54823 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Ddx6P54823 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx6P54823 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx6P54823 Gm10138-203ENSMUST00000206952 366 ntBASIC18.79■□□□□ 0.6
Ddx6P54823 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx6P54823 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx6P54823 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx6P54823 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx6P54823 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx6P54823 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ddx6P54823 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx6P54823 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.78■□□□□ 0.6
Ddx6P54823 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx6P54823 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ddx6P54823 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx6P54823 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx6P54823 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx6P54823 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx6P54823 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ddx6P54823 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx6P54823 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Ddx6P54823 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx6P54823 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx6P54823 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.77■□□□□ 0.6
Ddx6P54823 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.77■□□□□ 0.6
Ddx6P54823 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ddx6P54823 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.77■□□□□ 0.6
Ddx6P54823 Gm38285-201ENSMUST00000192928 922 ntBASIC18.77■□□□□ 0.6
Ddx6P54823 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Ddx6P54823 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.77■□□□□ 0.6
Ddx6P54823 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.77■□□□□ 0.6
Ddx6P54823 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx6P54823 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Ddx6P54823 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.77■□□□□ 0.6
Ddx6P54823 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx6P54823 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx6P54823 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx6P54823 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx6P54823 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx6P54823 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ddx6P54823 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ddx6P54823 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx6P54823 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.76■□□□□ 0.59
Ddx6P54823 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx6P54823 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx6P54823 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.76■□□□□ 0.59
Ddx6P54823 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx6P54823 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.76■□□□□ 0.59
Ddx6P54823 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx6P54823 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx6P54823 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx6P54823 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx6P54823 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx6P54823 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx6P54823 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx6P54823 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx6P54823 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx6P54823 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.75■□□□□ 0.59
Ddx6P54823 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.75■□□□□ 0.59
Ddx6P54823 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.75■□□□□ 0.59
Ddx6P54823 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ddx6P54823 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx6P54823 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx6P54823 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx6P54823 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.74■□□□□ 0.59
Ddx6P54823 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.74■□□□□ 0.59
Ddx6P54823 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ddx6P54823 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Ddx6P54823 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ddx6P54823 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx6P54823 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms