Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Lhx4P53776 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Lhx4P53776 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx4P53776 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx4P53776 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx4P53776 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx4P53776 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx4P53776 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx4P53776 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx4P53776 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Lhx4P53776 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.57■□□□□ 0.08
Lhx4P53776 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.57■□□□□ 0.08
Lhx4P53776 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Lhx4P53776 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.57■□□□□ 0.08
Lhx4P53776 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.57■□□□□ 0.08
Lhx4P53776 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.57■□□□□ 0.08
Lhx4P53776 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Lhx4P53776 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Lhx4P53776 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Lhx4P53776 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.56■□□□□ 0.08
Lhx4P53776 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Gm7860-201ENSMUST00000121190 879 ntBASIC15.56■□□□□ 0.08
Lhx4P53776 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Gm38205-201ENSMUST00000192243 258 ntBASIC15.56■□□□□ 0.08
Lhx4P53776 Gm37179-201ENSMUST00000194862 823 ntBASIC15.56■□□□□ 0.08
Lhx4P53776 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.56■□□□□ 0.08
Lhx4P53776 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.56■□□□□ 0.08
Lhx4P53776 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Lhx4P53776 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.55■□□□□ 0.08
Lhx4P53776 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.55■□□□□ 0.08
Lhx4P53776 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC15.55■□□□□ 0.08
Lhx4P53776 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.55■□□□□ 0.08
Lhx4P53776 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.55■□□□□ 0.08
Lhx4P53776 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.55■□□□□ 0.08
Lhx4P53776 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.55■□□□□ 0.08
Lhx4P53776 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.55■□□□□ 0.08
Lhx4P53776 Gm7514-201ENSMUST00000209475 934 ntBASIC15.55■□□□□ 0.08
Lhx4P53776 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Lhx4P53776 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Lhx4P53776 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.54■□□□□ 0.08
Lhx4P53776 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lhx4P53776 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx4P53776 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Lhx4P53776 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx4P53776 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx4P53776 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Lhx4P53776 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 932.6 ms