Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk1P53668 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk1P53668 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk1P53668 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.07■□□□□ 0.48
Limk1P53668 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk1P53668 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Limk1P53668 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.07■□□□□ 0.48
Limk1P53668 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.07■□□□□ 0.48
Limk1P53668 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.07■□□□□ 0.48
Limk1P53668 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk1P53668 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk1P53668 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Limk1P53668 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk1P53668 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk1P53668 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk1P53668 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.06■□□□□ 0.48
Limk1P53668 Gm27741-201ENSMUST00000185060 237 ntBASIC18.06■□□□□ 0.48
Limk1P53668 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.06■□□□□ 0.48
Limk1P53668 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.06■□□□□ 0.48
Limk1P53668 Gm7367-201ENSMUST00000057611 492 ntBASIC18.06■□□□□ 0.48
Limk1P53668 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Limk1P53668 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk1P53668 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.06■□□□□ 0.48
Limk1P53668 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Limk1P53668 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.05■□□□□ 0.48
Limk1P53668 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk1P53668 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.05■□□□□ 0.48
Limk1P53668 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk1P53668 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk1P53668 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Limk1P53668 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.05■□□□□ 0.48
Limk1P53668 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Limk1P53668 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Limk1P53668 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.05■□□□□ 0.48
Limk1P53668 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Limk1P53668 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Limk1P53668 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Limk1P53668 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Limk1P53668 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Limk1P53668 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Limk1P53668 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk1P53668 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Limk1P53668 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk1P53668 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk1P53668 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk1P53668 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk1P53668 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk1P53668 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Limk1P53668 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Limk1P53668 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk1P53668 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Limk1P53668 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk1P53668 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk1P53668 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk1P53668 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk1P53668 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Limk1P53668 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Limk1P53668 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Limk1P53668 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Limk1P53668 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Limk1P53668 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Limk1P53668 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Limk1P53668 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Limk1P53668 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Limk1P53668 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.02■□□□□ 0.48
Limk1P53668 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Limk1P53668 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.02■□□□□ 0.48
Limk1P53668 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Limk1P53668 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Limk1P53668 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Limk1P53668 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Limk1P53668 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Limk1P53668 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Limk1P53668 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.01■□□□□ 0.47
Limk1P53668 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Limk1P53668 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Limk1P53668 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Limk1P53668 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Limk1P53668 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Limk1P53668 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Limk1P53668 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18■□□□□ 0.47
Limk1P53668 Gm6659-201ENSMUST00000174752 547 ntBASIC18■□□□□ 0.47
Limk1P53668 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Limk1P53668 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18■□□□□ 0.47
Limk1P53668 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Limk1P53668 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Limk1P53668 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Limk1P53668 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Limk1P53668 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Limk1P53668 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Limk1P53668 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms