Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Gm38205-201ENSMUST00000192243 258 ntBASIC20.57■□□□□ 0.88
Nek1P51954 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.57■□□□□ 0.88
Nek1P51954 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.57■□□□□ 0.88
Nek1P51954 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nek1P51954 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nek1P51954 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nek1P51954 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek1P51954 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nek1P51954 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek1P51954 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nek1P51954 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek1P51954 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek1P51954 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.56■□□□□ 0.88
Nek1P51954 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nek1P51954 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek1P51954 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek1P51954 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.55■□□□□ 0.88
Nek1P51954 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nek1P51954 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nek1P51954 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nek1P51954 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.55■□□□□ 0.88
Nek1P51954 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek1P51954 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nek1P51954 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek1P51954 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek1P51954 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nek1P51954 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek1P51954 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek1P51954 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.55■□□□□ 0.88
Nek1P51954 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nek1P51954 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.54■□□□□ 0.88
Nek1P51954 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nek1P51954 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.54■□□□□ 0.88
Nek1P51954 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Nek1P51954 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nek1P51954 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Nek1P51954 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nek1P51954 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nek1P51954 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nek1P51954 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nek1P51954 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nek1P51954 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nek1P51954 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nek1P51954 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.53■□□□□ 0.88
Nek1P51954 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nek1P51954 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek1P51954 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nek1P51954 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek1P51954 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nek1P51954 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.52■□□□□ 0.88
Nek1P51954 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.52■□□□□ 0.88
Nek1P51954 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek1P51954 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek1P51954 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek1P51954 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek1P51954 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.52■□□□□ 0.88
Nek1P51954 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.52■□□□□ 0.88
Nek1P51954 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Nek1P51954 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.52■□□□□ 0.88
Nek1P51954 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nek1P51954 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nek1P51954 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nek1P51954 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nek1P51954 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nek1P51954 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.52■□□□□ 0.87
Nek1P51954 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.51■□□□□ 0.87
Nek1P51954 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nek1P51954 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nek1P51954 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.5■□□□□ 0.87
Nek1P51954 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nek1P51954 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nek1P51954 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nek1P51954 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.5■□□□□ 0.87
Nek1P51954 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.5■□□□□ 0.87
Nek1P51954 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.5■□□□□ 0.87
Nek1P51954 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.5■□□□□ 0.87
Nek1P51954 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Nek1P51954 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms