Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.57■□□□□ 0.4
CcnfP51944 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CcnfP51944 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.56■□□□□ 0.4
CcnfP51944 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.56■□□□□ 0.4
CcnfP51944 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CcnfP51944 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.56■□□□□ 0.4
CcnfP51944 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CcnfP51944 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.56■□□□□ 0.4
CcnfP51944 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CcnfP51944 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CcnfP51944 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CcnfP51944 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CcnfP51944 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CcnfP51944 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CcnfP51944 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.55■□□□□ 0.4
CcnfP51944 Gm12251-201ENSMUST00000117893 792 ntBASIC17.55■□□□□ 0.4
CcnfP51944 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.55■□□□□ 0.4
CcnfP51944 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CcnfP51944 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.55■□□□□ 0.4
CcnfP51944 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.55■□□□□ 0.4
CcnfP51944 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CcnfP51944 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CcnfP51944 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CcnfP51944 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CcnfP51944 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.54■□□□□ 0.4
CcnfP51944 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CcnfP51944 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CcnfP51944 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.53■□□□□ 0.4
CcnfP51944 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CcnfP51944 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CcnfP51944 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CcnfP51944 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CcnfP51944 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CcnfP51944 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CcnfP51944 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CcnfP51944 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CcnfP51944 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CcnfP51944 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CcnfP51944 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.52■□□□□ 0.4
CcnfP51944 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.52■□□□□ 0.4
CcnfP51944 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CcnfP51944 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CcnfP51944 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CcnfP51944 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CcnfP51944 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CcnfP51944 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CcnfP51944 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CcnfP51944 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.51■□□□□ 0.39
CcnfP51944 Gm27801-201ENSMUST00000184174 223 ntBASIC17.51■□□□□ 0.39
CcnfP51944 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CcnfP51944 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.51■□□□□ 0.39
CcnfP51944 Tgds-204ENSMUST00000228543 1594 ntBASIC17.51■□□□□ 0.39
CcnfP51944 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms