Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Brca1P48754 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Brca1P48754 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Brca1P48754 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Brca1P48754 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Brca1P48754 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.98■□□□□ 0.95
Brca1P48754 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Brca1P48754 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Brca1P48754 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Brca1P48754 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Brca1P48754 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.98■□□□□ 0.95
Brca1P48754 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Brca1P48754 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Gm10013-201ENSMUST00000106074 672 ntBASIC20.97■□□□□ 0.95
Brca1P48754 Gm38285-201ENSMUST00000192928 922 ntBASIC20.97■□□□□ 0.95
Brca1P48754 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.97■□□□□ 0.95
Brca1P48754 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.97■□□□□ 0.95
Brca1P48754 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.97■□□□□ 0.95
Brca1P48754 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Brca1P48754 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Brca1P48754 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Brca1P48754 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Brca1P48754 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.96■□□□□ 0.95
Brca1P48754 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Brca1P48754 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Brca1P48754 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.95■□□□□ 0.94
Brca1P48754 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Brca1P48754 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Brca1P48754 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Brca1P48754 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Brca1P48754 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Brca1P48754 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Brca1P48754 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.95■□□□□ 0.94
Brca1P48754 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Brca1P48754 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Brca1P48754 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brca1P48754 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brca1P48754 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Brca1P48754 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Brca1P48754 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.94■□□□□ 0.94
Brca1P48754 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Brca1P48754 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.94■□□□□ 0.94
Brca1P48754 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Brca1P48754 Gm42545-201ENSMUST00000202755 922 ntBASIC20.94■□□□□ 0.94
Brca1P48754 Gm18959-201ENSMUST00000208954 655 ntBASIC20.94■□□□□ 0.94
Brca1P48754 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brca1P48754 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brca1P48754 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.93■□□□□ 0.94
Brca1P48754 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brca1P48754 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brca1P48754 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Brca1P48754 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.93■□□□□ 0.94
Brca1P48754 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brca1P48754 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Brca1P48754 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brca1P48754 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.92■□□□□ 0.94
Brca1P48754 AA414768-201ENSMUST00000121924 1257 ntBASIC20.92■□□□□ 0.94
Brca1P48754 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brca1P48754 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Brca1P48754 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.92■□□□□ 0.94
Brca1P48754 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.92■□□□□ 0.94
Brca1P48754 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Brca1P48754 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Brca1P48754 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brca1P48754 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brca1P48754 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Brca1P48754 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Brca1P48754 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Brca1P48754 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.91■□□□□ 0.94
Brca1P48754 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.91■□□□□ 0.94
Brca1P48754 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.91■□□□□ 0.94
Brca1P48754 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brca1P48754 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brca1P48754 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brca1P48754 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brca1P48754 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brca1P48754 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Brca1P48754 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Brca1P48754 Mir6349-201ENSMUST00000184059 97 ntBASIC20.9■□□□□ 0.94
Brca1P48754 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brca1P48754 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.9■□□□□ 0.94
Brca1P48754 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brca1P48754 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.9■□□□□ 0.94
Brca1P48754 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brca1P48754 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Brca1P48754 Gm9103-201ENSMUST00000119371 405 ntBASIC20.9■□□□□ 0.94
Brca1P48754 Gm17971-201ENSMUST00000190239 806 ntBASIC20.9■□□□□ 0.94
Brca1P48754 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brca1P48754 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brca1P48754 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brca1P48754 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms