Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.96■□□□□ 0.79
HttP42859 Gm17807-201ENSMUST00000186869 298 ntBASIC19.96■□□□□ 0.79
HttP42859 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HttP42859 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HttP42859 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.96■□□□□ 0.79
HttP42859 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
HttP42859 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HttP42859 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
HttP42859 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HttP42859 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HttP42859 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HttP42859 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HttP42859 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HttP42859 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HttP42859 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HttP42859 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HttP42859 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HttP42859 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HttP42859 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HttP42859 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
HttP42859 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HttP42859 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
HttP42859 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.95■□□□□ 0.78
HttP42859 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.95■□□□□ 0.78
HttP42859 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HttP42859 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HttP42859 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HttP42859 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.94■□□□□ 0.78
HttP42859 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 Gm18669-201ENSMUST00000216049 778 ntBASIC19.94■□□□□ 0.78
HttP42859 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HttP42859 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.93■□□□□ 0.78
HttP42859 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.93■□□□□ 0.78
HttP42859 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.93■□□□□ 0.78
HttP42859 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HttP42859 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.93■□□□□ 0.78
HttP42859 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HttP42859 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.93■□□□□ 0.78
HttP42859 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HttP42859 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HttP42859 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HttP42859 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HttP42859 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.92■□□□□ 0.78
HttP42859 Gm43514-201ENSMUST00000198852 424 ntBASIC19.92■□□□□ 0.78
HttP42859 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.92■□□□□ 0.78
HttP42859 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.92■□□□□ 0.78
HttP42859 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HttP42859 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HttP42859 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HttP42859 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.92■□□□□ 0.78
HttP42859 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HttP42859 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HttP42859 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HttP42859 Gm27704-201ENSMUST00000185094 107 ntBASIC19.91■□□□□ 0.78
HttP42859 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
HttP42859 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HttP42859 Mir5130-201ENSMUST00000175160 84 ntBASIC19.91■□□□□ 0.78
HttP42859 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.91■□□□□ 0.78
HttP42859 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HttP42859 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HttP42859 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HttP42859 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HttP42859 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.9■□□□□ 0.78
HttP42859 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HttP42859 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
HttP42859 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.9■□□□□ 0.78
HttP42859 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HttP42859 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HttP42859 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HttP42859 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.89■□□□□ 0.78
HttP42859 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.89■□□□□ 0.78
HttP42859 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
HttP42859 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HttP42859 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HttP42859 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HttP42859 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HttP42859 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HttP42859 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.89■□□□□ 0.77
HttP42859 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.89■□□□□ 0.77
HttP42859 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HttP42859 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HttP42859 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HttP42859 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms