Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Sox6P40645 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.31■□□□□ 0.36
Sox6P40645 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Sox6P40645 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.31■□□□□ 0.36
Sox6P40645 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox6P40645 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox6P40645 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.31■□□□□ 0.36
Sox6P40645 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.31■□□□□ 0.36
Sox6P40645 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox6P40645 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox6P40645 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox6P40645 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sox6P40645 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.3■□□□□ 0.36
Sox6P40645 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Sox6P40645 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.3■□□□□ 0.36
Sox6P40645 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.3■□□□□ 0.36
Sox6P40645 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.3■□□□□ 0.36
Sox6P40645 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.3■□□□□ 0.36
Sox6P40645 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sox6P40645 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sox6P40645 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox6P40645 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox6P40645 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox6P40645 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sox6P40645 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sox6P40645 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.29■□□□□ 0.36
Sox6P40645 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox6P40645 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox6P40645 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.29■□□□□ 0.36
Sox6P40645 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sox6P40645 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox6P40645 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sox6P40645 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox6P40645 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox6P40645 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox6P40645 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.28■□□□□ 0.36
Sox6P40645 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sox6P40645 Gm27801-201ENSMUST00000184174 223 ntBASIC17.28■□□□□ 0.36
Sox6P40645 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox6P40645 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox6P40645 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.28■□□□□ 0.36
Sox6P40645 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.28■□□□□ 0.36
Sox6P40645 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sox6P40645 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox6P40645 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sox6P40645 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sox6P40645 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox6P40645 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.27■□□□□ 0.36
Sox6P40645 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox6P40645 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox6P40645 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox6P40645 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.27■□□□□ 0.36
Sox6P40645 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox6P40645 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sox6P40645 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox6P40645 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.27■□□□□ 0.36
Sox6P40645 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sox6P40645 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sox6P40645 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Sox6P40645 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox6P40645 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Sox6P40645 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox6P40645 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox6P40645 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox6P40645 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sox6P40645 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.26■□□□□ 0.35
Sox6P40645 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sox6P40645 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sox6P40645 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sox6P40645 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox6P40645 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms