Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Slc6a1P31648 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.86■□□□□ 0.13
Slc6a1P31648 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Slc6a1P31648 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Slc6a1P31648 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Slc6a1P31648 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.85■□□□□ 0.13
Slc6a1P31648 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Slc6a1P31648 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Slc6a1P31648 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Slc6a1P31648 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Slc6a1P31648 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.85■□□□□ 0.13
Slc6a1P31648 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Slc6a1P31648 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.84■□□□□ 0.13
Slc6a1P31648 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Slc6a1P31648 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.84■□□□□ 0.13
Slc6a1P31648 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Slc6a1P31648 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.84■□□□□ 0.13
Slc6a1P31648 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slc6a1P31648 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.84■□□□□ 0.13
Slc6a1P31648 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a1P31648 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a1P31648 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a1P31648 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a1P31648 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a1P31648 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slc6a1P31648 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a1P31648 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.83■□□□□ 0.12
Slc6a1P31648 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Slc6a1P31648 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Slc6a1P31648 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a1P31648 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a1P31648 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a1P31648 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Slc6a1P31648 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Slc6a1P31648 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slc6a1P31648 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Slc6a1P31648 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.82■□□□□ 0.12
Slc6a1P31648 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.82■□□□□ 0.12
Slc6a1P31648 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.82■□□□□ 0.12
Slc6a1P31648 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Slc6a1P31648 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.82■□□□□ 0.12
Slc6a1P31648 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slc6a1P31648 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Slc6a1P31648 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Slc6a1P31648 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a1P31648 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms