Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.55■□□□□ 0.56
RxrbP28704 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.55■□□□□ 0.56
RxrbP28704 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.55■□□□□ 0.56
RxrbP28704 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.55■□□□□ 0.56
RxrbP28704 Gm13241-201ENSMUST00000094493 780 ntBASIC18.55■□□□□ 0.56
RxrbP28704 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RxrbP28704 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RxrbP28704 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RxrbP28704 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.55■□□□□ 0.56
RxrbP28704 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RxrbP28704 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RxrbP28704 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RxrbP28704 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RxrbP28704 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RxrbP28704 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RxrbP28704 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RxrbP28704 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RxrbP28704 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RxrbP28704 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RxrbP28704 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RxrbP28704 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RxrbP28704 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RxrbP28704 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RxrbP28704 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RxrbP28704 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.53■□□□□ 0.56
RxrbP28704 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RxrbP28704 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RxrbP28704 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RxrbP28704 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.52■□□□□ 0.56
RxrbP28704 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
RxrbP28704 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
RxrbP28704 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RxrbP28704 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.52■□□□□ 0.56
RxrbP28704 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RxrbP28704 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RxrbP28704 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RxrbP28704 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RxrbP28704 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RxrbP28704 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RxrbP28704 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RxrbP28704 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RxrbP28704 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RxrbP28704 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
RxrbP28704 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Gm43137-201ENSMUST00000198052 594 ntBASIC18.5■□□□□ 0.55
RxrbP28704 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
RxrbP28704 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RxrbP28704 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RxrbP28704 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RxrbP28704 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.49■□□□□ 0.55
RxrbP28704 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RxrbP28704 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
RxrbP28704 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RxrbP28704 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
RxrbP28704 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RxrbP28704 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RxrbP28704 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RxrbP28704 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RxrbP28704 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RxrbP28704 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RxrbP28704 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RxrbP28704 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RxrbP28704 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RxrbP28704 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.48■□□□□ 0.55
RxrbP28704 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
RxrbP28704 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RxrbP28704 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms