Protein–RNA interactions for Protein: P28236

Gja8, Gap junction alpha-8 protein, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja8P28236 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.56■□□□□ 0.88
Gja8P28236 Gm11539-201ENSMUST00000119837 557 ntBASIC20.56■□□□□ 0.88
Gja8P28236 Gm13436-201ENSMUST00000120418 567 ntBASIC20.56■□□□□ 0.88
Gja8P28236 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Gja8P28236 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gja8P28236 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.56■□□□□ 0.88
Gja8P28236 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gja8P28236 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gja8P28236 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gja8P28236 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Gja8P28236 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Gja8P28236 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Gja8P28236 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Gja8P28236 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.55■□□□□ 0.88
Gja8P28236 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Gja8P28236 Gm11927-201ENSMUST00000118472 759 ntBASIC20.55■□□□□ 0.88
Gja8P28236 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.55■□□□□ 0.88
Gja8P28236 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gja8P28236 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.55■□□□□ 0.88
Gja8P28236 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Gja8P28236 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gja8P28236 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gja8P28236 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gja8P28236 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gja8P28236 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gja8P28236 Flg-201ENSMUST00000050758 1488 ntBASIC20.54■□□□□ 0.88
Gja8P28236 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gja8P28236 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Gja8P28236 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gja8P28236 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gja8P28236 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gja8P28236 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gja8P28236 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gja8P28236 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gja8P28236 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gja8P28236 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gja8P28236 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gja8P28236 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.53■□□□□ 0.88
Gja8P28236 Gm7889-201ENSMUST00000185591 958 ntBASIC20.53■□□□□ 0.88
Gja8P28236 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.53■□□□□ 0.88
Gja8P28236 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gja8P28236 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gja8P28236 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gja8P28236 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gja8P28236 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Gja8P28236 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Gja8P28236 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.52■□□□□ 0.88
Gja8P28236 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.52■□□□□ 0.88
Gja8P28236 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.52■□□□□ 0.88
Gja8P28236 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.52■□□□□ 0.88
Gja8P28236 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gja8P28236 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gja8P28236 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gja8P28236 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gja8P28236 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Gja8P28236 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.51■□□□□ 0.87
Gja8P28236 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Gja8P28236 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Gja8P28236 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gja8P28236 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gja8P28236 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Gja8P28236 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gja8P28236 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gja8P28236 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gja8P28236 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gja8P28236 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Gja8P28236 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Gja8P28236 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms