Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.74■□□□□ 0.27
Cd40P27512 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Cd40P27512 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.73■□□□□ 0.27
Cd40P27512 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.73■□□□□ 0.27
Cd40P27512 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 Gm12933-201ENSMUST00000120203 872 ntBASIC16.73■□□□□ 0.27
Cd40P27512 Gm6211-202ENSMUST00000167849 925 ntBASIC16.73■□□□□ 0.27
Cd40P27512 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cd40P27512 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.73■□□□□ 0.27
Cd40P27512 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cd40P27512 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Cd40P27512 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cd40P27512 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Cd40P27512 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd40P27512 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd40P27512 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cd40P27512 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.72■□□□□ 0.27
Cd40P27512 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.72■□□□□ 0.27
Cd40P27512 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.72■□□□□ 0.27
Cd40P27512 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd40P27512 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd40P27512 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd40P27512 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd40P27512 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd40P27512 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd40P27512 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cd40P27512 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.71■□□□□ 0.27
Cd40P27512 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.71■□□□□ 0.27
Cd40P27512 Mir5133-201ENSMUST00000174955 77 ntBASIC16.71■□□□□ 0.27
Cd40P27512 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.71■□□□□ 0.27
Cd40P27512 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cd40P27512 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.7■□□□□ 0.26
Cd40P27512 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cd40P27512 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cd40P27512 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cd40P27512 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Cd40P27512 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cd40P27512 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd40P27512 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd40P27512 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.69■□□□□ 0.26
Cd40P27512 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd40P27512 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd40P27512 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.69■□□□□ 0.26
Cd40P27512 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cd40P27512 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.69■□□□□ 0.26
Cd40P27512 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd40P27512 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cd40P27512 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Cd40P27512 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd40P27512 Gm22325-201ENSMUST00000158904 308 ntBASIC16.68■□□□□ 0.26
Cd40P27512 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.68■□□□□ 0.26
Cd40P27512 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd40P27512 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd40P27512 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd40P27512 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.68■□□□□ 0.26
Cd40P27512 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cd40P27512 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.67■□□□□ 0.26
Cd40P27512 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cd40P27512 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cd40P27512 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms