Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BdnfP21237 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BdnfP21237 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.63■□□□□ 0.41
BdnfP21237 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BdnfP21237 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 Fst-202ENSMUST00000223640 2612 ntBASIC17.62■□□□□ 0.41
BdnfP21237 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
BdnfP21237 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.62■□□□□ 0.41
BdnfP21237 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
BdnfP21237 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BdnfP21237 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.62■□□□□ 0.41
BdnfP21237 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.61■□□□□ 0.41
BdnfP21237 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.61■□□□□ 0.41
BdnfP21237 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BdnfP21237 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
BdnfP21237 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.61■□□□□ 0.41
BdnfP21237 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.61■□□□□ 0.41
BdnfP21237 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BdnfP21237 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
BdnfP21237 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.6■□□□□ 0.41
BdnfP21237 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
BdnfP21237 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BdnfP21237 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.59■□□□□ 0.41
BdnfP21237 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.59■□□□□ 0.41
BdnfP21237 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
BdnfP21237 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BdnfP21237 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
BdnfP21237 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.58■□□□□ 0.41
BdnfP21237 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BdnfP21237 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.58■□□□□ 0.41
BdnfP21237 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BdnfP21237 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BdnfP21237 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BdnfP21237 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
BdnfP21237 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BdnfP21237 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
BdnfP21237 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
BdnfP21237 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
BdnfP21237 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.58■□□□□ 0.4
BdnfP21237 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BdnfP21237 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
BdnfP21237 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BdnfP21237 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BdnfP21237 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BdnfP21237 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BdnfP21237 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BdnfP21237 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
BdnfP21237 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BdnfP21237 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BdnfP21237 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BdnfP21237 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
BdnfP21237 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BdnfP21237 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BdnfP21237 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms