Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cd44P15379 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.42■□□□□ 0.7
Cd44P15379 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.42■□□□□ 0.7
Cd44P15379 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cd44P15379 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cd44P15379 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cd44P15379 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.41■□□□□ 0.7
Cd44P15379 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.41■□□□□ 0.7
Cd44P15379 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.41■□□□□ 0.7
Cd44P15379 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cd44P15379 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cd44P15379 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.41■□□□□ 0.7
Cd44P15379 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd44P15379 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd44P15379 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd44P15379 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.4■□□□□ 0.7
Cd44P15379 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd44P15379 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd44P15379 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd44P15379 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cd44P15379 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd44P15379 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cd44P15379 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cd44P15379 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cd44P15379 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cd44P15379 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd44P15379 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd44P15379 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.39■□□□□ 0.69
Cd44P15379 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cd44P15379 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cd44P15379 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd44P15379 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd44P15379 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Cd44P15379 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cd44P15379 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.38■□□□□ 0.69
Cd44P15379 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cd44P15379 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd44P15379 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cd44P15379 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.38■□□□□ 0.69
Cd44P15379 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.38■□□□□ 0.69
Cd44P15379 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.38■□□□□ 0.69
Cd44P15379 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd44P15379 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd44P15379 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd44P15379 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.38■□□□□ 0.69
Cd44P15379 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd44P15379 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.38■□□□□ 0.69
Cd44P15379 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Cd44P15379 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd44P15379 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd44P15379 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cd44P15379 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Cd44P15379 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd44P15379 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd44P15379 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd44P15379 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd44P15379 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd44P15379 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cd44P15379 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd44P15379 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cd44P15379 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.36■□□□□ 0.69
Cd44P15379 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cd44P15379 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd44P15379 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.36■□□□□ 0.69
Cd44P15379 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cd44P15379 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cd44P15379 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.36■□□□□ 0.69
Cd44P15379 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd44P15379 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cd44P15379 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd44P15379 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cd44P15379 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cd44P15379 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.35■□□□□ 0.69
Cd44P15379 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd44P15379 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd44P15379 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.35■□□□□ 0.69
Cd44P15379 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.35■□□□□ 0.69
Cd44P15379 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd44P15379 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cd44P15379 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd44P15379 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cd44P15379 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd44P15379 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cd44P15379 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd44P15379 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd44P15379 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.35■□□□□ 0.69
Cd44P15379 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cd44P15379 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.34■□□□□ 0.69
Cd44P15379 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cd44P15379 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms