Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
ApoeP08226 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.44■□□□□ 0.38
ApoeP08226 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ApoeP08226 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
ApoeP08226 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ApoeP08226 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.43■□□□□ 0.38
ApoeP08226 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ApoeP08226 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ApoeP08226 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.42■□□□□ 0.38
ApoeP08226 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.42■□□□□ 0.38
ApoeP08226 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
ApoeP08226 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
ApoeP08226 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.42■□□□□ 0.38
ApoeP08226 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ApoeP08226 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.41■□□□□ 0.38
ApoeP08226 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ApoeP08226 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.41■□□□□ 0.38
ApoeP08226 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.41■□□□□ 0.38
ApoeP08226 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.41■□□□□ 0.38
ApoeP08226 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.41■□□□□ 0.38
ApoeP08226 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ApoeP08226 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ApoeP08226 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
ApoeP08226 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ApoeP08226 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ApoeP08226 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ApoeP08226 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ApoeP08226 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ApoeP08226 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.4■□□□□ 0.38
ApoeP08226 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ApoeP08226 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ApoeP08226 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ApoeP08226 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ApoeP08226 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ApoeP08226 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.4■□□□□ 0.38
ApoeP08226 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
ApoeP08226 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.39■□□□□ 0.38
ApoeP08226 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.39■□□□□ 0.37
ApoeP08226 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.39■□□□□ 0.37
ApoeP08226 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ApoeP08226 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ApoeP08226 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ApoeP08226 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ApoeP08226 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.39■□□□□ 0.37
ApoeP08226 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ApoeP08226 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ApoeP08226 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ApoeP08226 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms