Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.36■□□□□ 0.37
Col4a2P08122 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.36■□□□□ 0.37
Col4a2P08122 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a2P08122 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.35■□□□□ 0.37
Col4a2P08122 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a2P08122 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a2P08122 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a2P08122 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a2P08122 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a2P08122 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a2P08122 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a2P08122 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Col4a2P08122 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Col4a2P08122 Gm5417-201ENSMUST00000079706 384 ntBASIC17.35■□□□□ 0.37
Col4a2P08122 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col4a2P08122 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a2P08122 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col4a2P08122 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.34■□□□□ 0.37
Col4a2P08122 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.34■□□□□ 0.37
Col4a2P08122 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a2P08122 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a2P08122 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a2P08122 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Col4a2P08122 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a2P08122 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col4a2P08122 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a2P08122 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Col4a2P08122 Gm6433-201ENSMUST00000118634 875 ntBASIC17.33■□□□□ 0.37
Col4a2P08122 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a2P08122 Gm21814-202ENSMUST00000203277 873 ntBASIC17.33■□□□□ 0.37
Col4a2P08122 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col4a2P08122 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.33■□□□□ 0.36
Col4a2P08122 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a2P08122 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a2P08122 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a2P08122 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a2P08122 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a2P08122 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Col4a2P08122 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.33■□□□□ 0.36
Col4a2P08122 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.33■□□□□ 0.36
Col4a2P08122 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col4a2P08122 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.33■□□□□ 0.36
Col4a2P08122 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.33■□□□□ 0.36
Col4a2P08122 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Col4a2P08122 BC021767-201ENSMUST00000126387 1716 ntBASIC17.32■□□□□ 0.36
Col4a2P08122 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col4a2P08122 Flg-201ENSMUST00000050758 1488 ntBASIC17.31■□□□□ 0.36
Col4a2P08122 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Col4a2P08122 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Col4a2P08122 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a2P08122 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a2P08122 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a2P08122 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a2P08122 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col4a2P08122 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.3■□□□□ 0.36
Col4a2P08122 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col4a2P08122 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.3■□□□□ 0.36
Col4a2P08122 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.3■□□□□ 0.36
Col4a2P08122 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.3■□□□□ 0.36
Col4a2P08122 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Col4a2P08122 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col4a2P08122 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.3■□□□□ 0.36
Col4a2P08122 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col4a2P08122 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a2P08122 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a2P08122 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a2P08122 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.29■□□□□ 0.36
Col4a2P08122 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a2P08122 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Col4a2P08122 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.29■□□□□ 0.36
Col4a2P08122 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a2P08122 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a2P08122 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms