Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PdgfrbP05622 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PdgfrbP05622 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PdgfrbP05622 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PdgfrbP05622 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.65■□□□□ 0.58
PdgfrbP05622 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PdgfrbP05622 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PdgfrbP05622 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PdgfrbP05622 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PdgfrbP05622 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PdgfrbP05622 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PdgfrbP05622 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PdgfrbP05622 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PdgfrbP05622 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PdgfrbP05622 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PdgfrbP05622 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PdgfrbP05622 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
PdgfrbP05622 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PdgfrbP05622 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PdgfrbP05622 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PdgfrbP05622 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
PdgfrbP05622 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PdgfrbP05622 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PdgfrbP05622 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.64■□□□□ 0.57
PdgfrbP05622 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PdgfrbP05622 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.64■□□□□ 0.57
PdgfrbP05622 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PdgfrbP05622 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PdgfrbP05622 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PdgfrbP05622 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.63■□□□□ 0.57
PdgfrbP05622 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PdgfrbP05622 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PdgfrbP05622 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.63■□□□□ 0.57
PdgfrbP05622 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PdgfrbP05622 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PdgfrbP05622 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PdgfrbP05622 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.62■□□□□ 0.57
PdgfrbP05622 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PdgfrbP05622 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PdgfrbP05622 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PdgfrbP05622 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PdgfrbP05622 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PdgfrbP05622 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PdgfrbP05622 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PdgfrbP05622 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PdgfrbP05622 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PdgfrbP05622 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PdgfrbP05622 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PdgfrbP05622 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PdgfrbP05622 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PdgfrbP05622 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PdgfrbP05622 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.6■□□□□ 0.57
PdgfrbP05622 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.6■□□□□ 0.57
PdgfrbP05622 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PdgfrbP05622 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PdgfrbP05622 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PdgfrbP05622 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.6■□□□□ 0.57
PdgfrbP05622 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.6■□□□□ 0.57
PdgfrbP05622 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.6■□□□□ 0.57
PdgfrbP05622 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.6■□□□□ 0.57
PdgfrbP05622 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PdgfrbP05622 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PdgfrbP05622 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PdgfrbP05622 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PdgfrbP05622 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PdgfrbP05622 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PdgfrbP05622 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.59■□□□□ 0.57
PdgfrbP05622 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PdgfrbP05622 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PdgfrbP05622 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PdgfrbP05622 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PdgfrbP05622 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PdgfrbP05622 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PdgfrbP05622 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PdgfrbP05622 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PdgfrbP05622 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PdgfrbP05622 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PdgfrbP05622 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
PdgfrbP05622 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PdgfrbP05622 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PdgfrbP05622 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PdgfrbP05622 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.57■□□□□ 0.56
PdgfrbP05622 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.57■□□□□ 0.56
PdgfrbP05622 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PdgfrbP05622 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms