Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CopeO89079 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CopeO89079 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CopeO89079 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Smad6-203ENSMUST00000179458 273 ntBASIC19.07■□□□□ 0.64
CopeO89079 Gm27801-201ENSMUST00000184174 223 ntBASIC19.07■□□□□ 0.64
CopeO89079 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.07■□□□□ 0.64
CopeO89079 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CopeO89079 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CopeO89079 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CopeO89079 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.06■□□□□ 0.64
CopeO89079 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.06■□□□□ 0.64
CopeO89079 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.06■□□□□ 0.64
CopeO89079 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.06■□□□□ 0.64
CopeO89079 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CopeO89079 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CopeO89079 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.06■□□□□ 0.64
CopeO89079 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CopeO89079 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CopeO89079 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CopeO89079 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CopeO89079 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.05■□□□□ 0.64
CopeO89079 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CopeO89079 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CopeO89079 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CopeO89079 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CopeO89079 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.05■□□□□ 0.64
CopeO89079 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CopeO89079 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CopeO89079 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CopeO89079 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.04■□□□□ 0.64
CopeO89079 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CopeO89079 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.04■□□□□ 0.64
CopeO89079 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.04■□□□□ 0.64
CopeO89079 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.04■□□□□ 0.64
CopeO89079 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CopeO89079 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CopeO89079 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.03■□□□□ 0.64
CopeO89079 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CopeO89079 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CopeO89079 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CopeO89079 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CopeO89079 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CopeO89079 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.03■□□□□ 0.64
CopeO89079 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CopeO89079 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CopeO89079 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CopeO89079 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CopeO89079 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CopeO89079 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CopeO89079 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CopeO89079 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CopeO89079 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CopeO89079 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.02■□□□□ 0.64
CopeO89079 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.02■□□□□ 0.64
CopeO89079 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.02■□□□□ 0.64
CopeO89079 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CopeO89079 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CopeO89079 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CopeO89079 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CopeO89079 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CopeO89079 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.02■□□□□ 0.63
CopeO89079 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CopeO89079 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CopeO89079 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CopeO89079 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CopeO89079 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CopeO89079 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CopeO89079 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CopeO89079 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CopeO89079 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CopeO89079 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms