Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.8■□□□□ 0.44
Best1O88870 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Best1O88870 Gm11927-201ENSMUST00000118472 759 ntBASIC17.8■□□□□ 0.44
Best1O88870 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Best1O88870 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.8■□□□□ 0.44
Best1O88870 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Best1O88870 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Best1O88870 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Best1O88870 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Best1O88870 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Best1O88870 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Best1O88870 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Best1O88870 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Best1O88870 Zfp783-201ENSMUST00000095946 670 ntBASIC17.79■□□□□ 0.44
Best1O88870 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Best1O88870 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Best1O88870 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.79■□□□□ 0.44
Best1O88870 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Best1O88870 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Best1O88870 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Best1O88870 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Best1O88870 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Best1O88870 Gm13158-201ENSMUST00000122007 736 ntBASIC17.78■□□□□ 0.44
Best1O88870 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Best1O88870 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Best1O88870 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Best1O88870 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.78■□□□□ 0.44
Best1O88870 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.78■□□□□ 0.44
Best1O88870 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Best1O88870 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Best1O88870 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Best1O88870 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Best1O88870 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Best1O88870 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Best1O88870 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Best1O88870 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Best1O88870 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.77■□□□□ 0.44
Best1O88870 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Best1O88870 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Best1O88870 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Best1O88870 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Best1O88870 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Best1O88870 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Best1O88870 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Best1O88870 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Best1O88870 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Best1O88870 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Best1O88870 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.76■□□□□ 0.43
Best1O88870 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.76■□□□□ 0.43
Best1O88870 Gm38285-201ENSMUST00000192928 922 ntBASIC17.76■□□□□ 0.43
Best1O88870 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.76■□□□□ 0.43
Best1O88870 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Best1O88870 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Best1O88870 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Best1O88870 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Best1O88870 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Best1O88870 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Best1O88870 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.75■□□□□ 0.43
Best1O88870 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.75■□□□□ 0.43
Best1O88870 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Best1O88870 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.74■□□□□ 0.43
Best1O88870 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Best1O88870 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Best1O88870 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Best1O88870 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.73■□□□□ 0.43
Best1O88870 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Best1O88870 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Best1O88870 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.73■□□□□ 0.43
Best1O88870 Gm10812-201ENSMUST00000099864 546 ntBASIC17.73■□□□□ 0.43
Best1O88870 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Best1O88870 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms