Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ShdO88834 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ShdO88834 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.86■□□□□ 0.61
ShdO88834 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.86■□□□□ 0.61
ShdO88834 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ShdO88834 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ShdO88834 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShdO88834 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ShdO88834 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ShdO88834 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShdO88834 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ShdO88834 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShdO88834 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
ShdO88834 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShdO88834 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.84■□□□□ 0.61
ShdO88834 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ShdO88834 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.84■□□□□ 0.61
ShdO88834 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShdO88834 Gm37179-201ENSMUST00000194862 823 ntBASIC18.84■□□□□ 0.61
ShdO88834 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.84■□□□□ 0.61
ShdO88834 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.84■□□□□ 0.61
ShdO88834 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ShdO88834 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ShdO88834 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ShdO88834 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ShdO88834 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ShdO88834 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ShdO88834 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
ShdO88834 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ShdO88834 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ShdO88834 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ShdO88834 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ShdO88834 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.83■□□□□ 0.6
ShdO88834 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.83■□□□□ 0.6
ShdO88834 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ShdO88834 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.82■□□□□ 0.6
ShdO88834 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.82■□□□□ 0.6
ShdO88834 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShdO88834 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShdO88834 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.82■□□□□ 0.6
ShdO88834 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ShdO88834 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShdO88834 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShdO88834 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ShdO88834 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ShdO88834 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShdO88834 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ShdO88834 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ShdO88834 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.81■□□□□ 0.6
ShdO88834 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ShdO88834 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShdO88834 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.81■□□□□ 0.6
ShdO88834 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ShdO88834 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.8■□□□□ 0.6
ShdO88834 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ShdO88834 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.8■□□□□ 0.6
ShdO88834 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.8■□□□□ 0.6
ShdO88834 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ShdO88834 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ShdO88834 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ShdO88834 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShdO88834 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ShdO88834 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ShdO88834 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms