Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.93■□□□□ 0.46
ClppO88696 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.93■□□□□ 0.46
ClppO88696 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ClppO88696 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ClppO88696 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ClppO88696 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ClppO88696 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ClppO88696 Gm8520-201ENSMUST00000186517 868 ntBASIC17.92■□□□□ 0.46
ClppO88696 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.92■□□□□ 0.46
ClppO88696 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.92■□□□□ 0.46
ClppO88696 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ClppO88696 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ClppO88696 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ClppO88696 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ClppO88696 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.91■□□□□ 0.46
ClppO88696 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ClppO88696 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClppO88696 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ClppO88696 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ClppO88696 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClppO88696 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.91■□□□□ 0.46
ClppO88696 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClppO88696 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClppO88696 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ClppO88696 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ClppO88696 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ClppO88696 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClppO88696 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClppO88696 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ClppO88696 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClppO88696 Gm12527-201ENSMUST00000117967 564 ntBASIC17.9■□□□□ 0.46
ClppO88696 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ClppO88696 Gm10653-202ENSMUST00000139570 835 ntBASIC17.9■□□□□ 0.46
ClppO88696 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
ClppO88696 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ClppO88696 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.9■□□□□ 0.46
ClppO88696 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ClppO88696 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.9■□□□□ 0.46
ClppO88696 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClppO88696 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClppO88696 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.9■□□□□ 0.46
ClppO88696 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
ClppO88696 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ClppO88696 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ClppO88696 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ClppO88696 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.89■□□□□ 0.45
ClppO88696 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ClppO88696 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
ClppO88696 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.89■□□□□ 0.45
ClppO88696 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
ClppO88696 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ClppO88696 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.89■□□□□ 0.45
ClppO88696 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
ClppO88696 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ClppO88696 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
ClppO88696 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.89■□□□□ 0.45
ClppO88696 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClppO88696 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClppO88696 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.88■□□□□ 0.45
ClppO88696 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ClppO88696 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ClppO88696 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ClppO88696 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClppO88696 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClppO88696 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClppO88696 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ClppO88696 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms