Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cops4O88544 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cops4O88544 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.03■□□□□ 0.32
Cops4O88544 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.02■□□□□ 0.32
Cops4O88544 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.02■□□□□ 0.32
Cops4O88544 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cops4O88544 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cops4O88544 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cops4O88544 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cops4O88544 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cops4O88544 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.01■□□□□ 0.31
Cops4O88544 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cops4O88544 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.01■□□□□ 0.31
Cops4O88544 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cops4O88544 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cops4O88544 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cops4O88544 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cops4O88544 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Cops4O88544 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cops4O88544 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cops4O88544 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cops4O88544 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Cops4O88544 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17■□□□□ 0.31
Cops4O88544 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cops4O88544 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cops4O88544 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cops4O88544 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cops4O88544 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.99■□□□□ 0.31
Cops4O88544 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.99■□□□□ 0.31
Cops4O88544 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.99■□□□□ 0.31
Cops4O88544 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops4O88544 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Cops4O88544 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Fst-202ENSMUST00000223640 2612 ntBASIC16.98■□□□□ 0.31
Cops4O88544 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.98■□□□□ 0.31
Cops4O88544 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cops4O88544 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.98■□□□□ 0.31
Cops4O88544 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops4O88544 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cops4O88544 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.97■□□□□ 0.31
Cops4O88544 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops4O88544 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms