Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Gm37292-201ENSMUST00000192062 758 ntBASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Gm45058-201ENSMUST00000205810 766 ntBASIC17.2■□□□□ 0.34
Tnfrsf17O88472 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf17O88472 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf17O88472 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf17O88472 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Gm44771-201ENSMUST00000206975 626 ntBASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfrsf17O88472 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Gm15375-201ENSMUST00000119510 849 ntBASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Gm7284-201ENSMUST00000131667 944 ntBASIC17.16■□□□□ 0.34
Tnfrsf17O88472 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Zfp783-201ENSMUST00000095946 670 ntBASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfrsf17O88472 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Tnfrsf17O88472 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfrsf17O88472 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms