Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col5a1O88207 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.82■□□□□ 0.28
Col5a1O88207 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.82■□□□□ 0.28
Col5a1O88207 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.82■□□□□ 0.28
Col5a1O88207 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a1O88207 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a1O88207 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col5a1O88207 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Col5a1O88207 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a1O88207 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.81■□□□□ 0.28
Col5a1O88207 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a1O88207 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a1O88207 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.81■□□□□ 0.28
Col5a1O88207 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Col5a1O88207 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a1O88207 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a1O88207 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col5a1O88207 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Col5a1O88207 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.8■□□□□ 0.28
Col5a1O88207 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.8■□□□□ 0.28
Col5a1O88207 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Col5a1O88207 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Notumos-201ENSMUST00000151998 2659 ntBASIC16.8■□□□□ 0.28
Col5a1O88207 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.8■□□□□ 0.28
Col5a1O88207 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Col5a1O88207 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col5a1O88207 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Col5a1O88207 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Gm30025-201ENSMUST00000218555 728 ntBASIC16.79■□□□□ 0.28
Col5a1O88207 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col5a1O88207 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col5a1O88207 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Col5a1O88207 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col5a1O88207 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col5a1O88207 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col5a1O88207 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Col5a1O88207 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col5a1O88207 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col5a1O88207 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col5a1O88207 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.78■□□□□ 0.28
Col5a1O88207 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Col5a1O88207 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.77■□□□□ 0.28
Col5a1O88207 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Col5a1O88207 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col5a1O88207 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col5a1O88207 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col5a1O88207 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Col5a1O88207 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Col5a1O88207 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.77■□□□□ 0.27
Col5a1O88207 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Col5a1O88207 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col5a1O88207 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col5a1O88207 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col5a1O88207 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.76■□□□□ 0.27
Col5a1O88207 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Col5a1O88207 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.76■□□□□ 0.27
Col5a1O88207 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Col5a1O88207 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col5a1O88207 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col5a1O88207 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col5a1O88207 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col5a1O88207 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Col5a1O88207 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Col5a1O88207 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Col5a1O88207 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms