Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prom1O54990 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prom1O54990 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Prom1O54990 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prom1O54990 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.45■□□□□ 0.87
Prom1O54990 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prom1O54990 Mir5122-201ENSMUST00000175004 89 ntBASIC20.45■□□□□ 0.86
Prom1O54990 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.45■□□□□ 0.86
Prom1O54990 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prom1O54990 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Prom1O54990 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.45■□□□□ 0.86
Prom1O54990 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prom1O54990 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Prom1O54990 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prom1O54990 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prom1O54990 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Prom1O54990 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prom1O54990 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prom1O54990 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Prom1O54990 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prom1O54990 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Prom1O54990 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.43■□□□□ 0.86
Prom1O54990 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prom1O54990 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prom1O54990 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prom1O54990 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prom1O54990 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prom1O54990 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.43■□□□□ 0.86
Prom1O54990 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.43■□□□□ 0.86
Prom1O54990 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.43■□□□□ 0.86
Prom1O54990 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prom1O54990 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prom1O54990 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
Prom1O54990 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Prom1O54990 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.42■□□□□ 0.86
Prom1O54990 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.42■□□□□ 0.86
Prom1O54990 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Gm9987-201ENSMUST00000069768 567 ntBASIC20.42■□□□□ 0.86
Prom1O54990 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Prom1O54990 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Prom1O54990 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prom1O54990 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.41■□□□□ 0.86
Prom1O54990 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Prom1O54990 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.41■□□□□ 0.86
Prom1O54990 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prom1O54990 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prom1O54990 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Prom1O54990 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.4■□□□□ 0.86
Prom1O54990 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
Prom1O54990 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.4■□□□□ 0.86
Prom1O54990 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Prom1O54990 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prom1O54990 Gm5417-201ENSMUST00000079706 384 ntBASIC20.4■□□□□ 0.86
Prom1O54990 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prom1O54990 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prom1O54990 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Prom1O54990 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prom1O54990 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prom1O54990 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.39■□□□□ 0.86
Prom1O54990 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Prom1O54990 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prom1O54990 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Prom1O54990 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Prom1O54990 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.39■□□□□ 0.85
Prom1O54990 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prom1O54990 Zfp783-201ENSMUST00000095946 670 ntBASIC20.39■□□□□ 0.85
Prom1O54990 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prom1O54990 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prom1O54990 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prom1O54990 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
Prom1O54990 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.38■□□□□ 0.85
Prom1O54990 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms