Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn5O54942 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cldn5O54942 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Trmt13-210ENSMUST00000198454 880 ntBASIC19.2■□□□□ 0.66
Cldn5O54942 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.2■□□□□ 0.66
Cldn5O54942 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Cldn5O54942 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.2■□□□□ 0.66
Cldn5O54942 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn5O54942 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.19■□□□□ 0.66
Cldn5O54942 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Cldn5O54942 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 Gm2559-201ENSMUST00000201323 363 ntBASIC19.19■□□□□ 0.66
Cldn5O54942 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.19■□□□□ 0.66
Cldn5O54942 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.19■□□□□ 0.66
Cldn5O54942 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cldn5O54942 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn5O54942 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn5O54942 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn5O54942 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn5O54942 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.18■□□□□ 0.66
Cldn5O54942 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cldn5O54942 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cldn5O54942 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn5O54942 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.18■□□□□ 0.66
Cldn5O54942 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.18■□□□□ 0.66
Cldn5O54942 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.18■□□□□ 0.66
Cldn5O54942 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.18■□□□□ 0.66
Cldn5O54942 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.18■□□□□ 0.66
Cldn5O54942 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cldn5O54942 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn5O54942 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn5O54942 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn5O54942 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn5O54942 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn5O54942 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cldn5O54942 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn5O54942 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.17■□□□□ 0.66
Cldn5O54942 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.17■□□□□ 0.66
Cldn5O54942 Gm22325-201ENSMUST00000158904 308 ntBASIC19.17■□□□□ 0.66
Cldn5O54942 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.17■□□□□ 0.66
Cldn5O54942 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.17■□□□□ 0.66
Cldn5O54942 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn5O54942 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn5O54942 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn5O54942 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn5O54942 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn5O54942 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Cldn5O54942 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn5O54942 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn5O54942 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn5O54942 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.16■□□□□ 0.66
Cldn5O54942 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.16■□□□□ 0.66
Cldn5O54942 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cldn5O54942 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn5O54942 Dio3-201ENSMUST00000097228 1449 ntBASIC19.16■□□□□ 0.66
Cldn5O54942 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn5O54942 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn5O54942 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cldn5O54942 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn5O54942 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn5O54942 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn5O54942 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.15■□□□□ 0.66
Cldn5O54942 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cldn5O54942 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn5O54942 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cldn5O54942 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn5O54942 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.15■□□□□ 0.66
Cldn5O54942 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cldn5O54942 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Cldn5O54942 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cldn5O54942 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cldn5O54942 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn5O54942 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.14■□□□□ 0.65
Cldn5O54942 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cldn5O54942 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.14■□□□□ 0.65
Cldn5O54942 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cldn5O54942 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.14■□□□□ 0.65
Cldn5O54942 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms