Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ChkaO54804 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ChkaO54804 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ChkaO54804 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChkaO54804 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChkaO54804 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChkaO54804 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChkaO54804 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChkaO54804 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChkaO54804 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ChkaO54804 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ChkaO54804 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChkaO54804 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ChkaO54804 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ChkaO54804 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ChkaO54804 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ChkaO54804 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChkaO54804 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ChkaO54804 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChkaO54804 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
ChkaO54804 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.64■□□□□ 0.57
ChkaO54804 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChkaO54804 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChkaO54804 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChkaO54804 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.63■□□□□ 0.57
ChkaO54804 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ChkaO54804 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.63■□□□□ 0.57
ChkaO54804 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Gm13146-201ENSMUST00000118508 780 ntBASIC18.63■□□□□ 0.57
ChkaO54804 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.63■□□□□ 0.57
ChkaO54804 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.63■□□□□ 0.57
ChkaO54804 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
ChkaO54804 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChkaO54804 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkaO54804 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkaO54804 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.62■□□□□ 0.57
ChkaO54804 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkaO54804 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkaO54804 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkaO54804 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkaO54804 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChkaO54804 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkaO54804 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkaO54804 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.61■□□□□ 0.57
ChkaO54804 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ChkaO54804 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ChkaO54804 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
ChkaO54804 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ChkaO54804 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ChkaO54804 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ChkaO54804 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkaO54804 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChkaO54804 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ChkaO54804 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkaO54804 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkaO54804 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ChkaO54804 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.6■□□□□ 0.57
ChkaO54804 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ChkaO54804 Fst-202ENSMUST00000223640 2612 ntBASIC18.6■□□□□ 0.57
ChkaO54804 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.6■□□□□ 0.57
ChkaO54804 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ChkaO54804 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkaO54804 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkaO54804 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ChkaO54804 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkaO54804 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.59■□□□□ 0.57
ChkaO54804 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ChkaO54804 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ChkaO54804 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkaO54804 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
ChkaO54804 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.59■□□□□ 0.57
ChkaO54804 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkaO54804 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkaO54804 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ChkaO54804 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ChkaO54804 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.59■□□□□ 0.57
ChkaO54804 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ChkaO54804 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ChkaO54804 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ChkaO54804 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
ChkaO54804 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ChkaO54804 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ChkaO54804 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ChkaO54804 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.58■□□□□ 0.56
ChkaO54804 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.58■□□□□ 0.56
ChkaO54804 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ChkaO54804 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ChkaO54804 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkaO54804 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ChkaO54804 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms