Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lsm2O35900 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm2O35900 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm2O35900 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lsm2O35900 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm2O35900 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsm2O35900 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm2O35900 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm2O35900 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm2O35900 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm2O35900 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Lsm2O35900 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsm2O35900 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm2O35900 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm2O35900 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.45■□□□□ 0.22
Lsm2O35900 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lsm2O35900 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm2O35900 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm2O35900 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm2O35900 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lsm2O35900 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lsm2O35900 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm2O35900 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm2O35900 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Lsm2O35900 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm2O35900 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lsm2O35900 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm2O35900 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm2O35900 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lsm2O35900 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.44■□□□□ 0.22
Lsm2O35900 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.43■□□□□ 0.22
Lsm2O35900 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Gm8969-201ENSMUST00000199694 526 ntBASIC16.43■□□□□ 0.22
Lsm2O35900 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.43■□□□□ 0.22
Lsm2O35900 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Lsm2O35900 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Lsm2O35900 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.43■□□□□ 0.22
Lsm2O35900 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm2O35900 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm2O35900 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Lsm2O35900 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.42■□□□□ 0.22
Lsm2O35900 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm2O35900 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm2O35900 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm2O35900 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm2O35900 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm2O35900 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Lsm2O35900 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm2O35900 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Lsm2O35900 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lsm2O35900 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Lsm2O35900 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm2O35900 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm2O35900 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm2O35900 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.41■□□□□ 0.22
Lsm2O35900 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm2O35900 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm2O35900 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm2O35900 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm2O35900 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.41■□□□□ 0.22
Lsm2O35900 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.41■□□□□ 0.22
Lsm2O35900 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lsm2O35900 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lsm2O35900 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Lsm2O35900 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.41■□□□□ 0.22
Lsm2O35900 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Lsm2O35900 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.4■□□□□ 0.22
Lsm2O35900 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.4■□□□□ 0.22
Lsm2O35900 Golgb1-201ENSMUST00000023534 498 ntBASIC16.4■□□□□ 0.22
Lsm2O35900 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Lsm2O35900 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.4■□□□□ 0.22
Lsm2O35900 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lsm2O35900 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.4■□□□□ 0.22
Lsm2O35900 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lsm2O35900 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.39■□□□□ 0.21
Lsm2O35900 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.39■□□□□ 0.21
Lsm2O35900 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms