Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sptlc1O35704 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sptlc1O35704 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Sptlc1O35704 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.21■□□□□ 0.83
Sptlc1O35704 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.21■□□□□ 0.83
Sptlc1O35704 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptlc1O35704 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sptlc1O35704 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Sptlc1O35704 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sptlc1O35704 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Sptlc1O35704 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sptlc1O35704 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Sptlc1O35704 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sptlc1O35704 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.2■□□□□ 0.82
Sptlc1O35704 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sptlc1O35704 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sptlc1O35704 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sptlc1O35704 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.19■□□□□ 0.82
Sptlc1O35704 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptlc1O35704 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.18■□□□□ 0.82
Sptlc1O35704 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Sptlc1O35704 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.18■□□□□ 0.82
Sptlc1O35704 Mir1199-201ENSMUST00000117015 119 ntBASIC20.18■□□□□ 0.82
Sptlc1O35704 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.18■□□□□ 0.82
Sptlc1O35704 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.18■□□□□ 0.82
Sptlc1O35704 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sptlc1O35704 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sptlc1O35704 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Sptlc1O35704 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.17■□□□□ 0.82
Sptlc1O35704 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptlc1O35704 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.16■□□□□ 0.82
Sptlc1O35704 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sptlc1O35704 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptlc1O35704 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptlc1O35704 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptlc1O35704 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sptlc1O35704 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptlc1O35704 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.16■□□□□ 0.82
Sptlc1O35704 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sptlc1O35704 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.16■□□□□ 0.82
Sptlc1O35704 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptlc1O35704 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.16■□□□□ 0.82
Sptlc1O35704 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptlc1O35704 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Sptlc1O35704 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sptlc1O35704 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sptlc1O35704 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sptlc1O35704 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sptlc1O35704 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Sptlc1O35704 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sptlc1O35704 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sptlc1O35704 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sptlc1O35704 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sptlc1O35704 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sptlc1O35704 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sptlc1O35704 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sptlc1O35704 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.14■□□□□ 0.81
Sptlc1O35704 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Sptlc1O35704 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms