Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.76■□□□□ 0.91
Stx1aO35526 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Stx1aO35526 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.75■□□□□ 0.91
Stx1aO35526 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Stx1aO35526 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.75■□□□□ 0.91
Stx1aO35526 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Stx1aO35526 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.75■□□□□ 0.91
Stx1aO35526 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Stx1aO35526 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stx1aO35526 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stx1aO35526 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stx1aO35526 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Stx1aO35526 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Stx1aO35526 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stx1aO35526 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.74■□□□□ 0.91
Stx1aO35526 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stx1aO35526 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Stx1aO35526 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Stx1aO35526 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Stx1aO35526 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Stx1aO35526 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stx1aO35526 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Stx1aO35526 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stx1aO35526 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stx1aO35526 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.73■□□□□ 0.91
Stx1aO35526 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stx1aO35526 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stx1aO35526 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stx1aO35526 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Stx1aO35526 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.72■□□□□ 0.91
Stx1aO35526 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Stx1aO35526 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Stx1aO35526 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stx1aO35526 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.72■□□□□ 0.91
Stx1aO35526 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Stx1aO35526 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stx1aO35526 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Stx1aO35526 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stx1aO35526 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stx1aO35526 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Stx1aO35526 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stx1aO35526 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Stx1aO35526 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Stx1aO35526 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stx1aO35526 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stx1aO35526 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Stx1aO35526 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.71■□□□□ 0.91
Stx1aO35526 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Stx1aO35526 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stx1aO35526 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stx1aO35526 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Stx1aO35526 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Stx1aO35526 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.7■□□□□ 0.9
Stx1aO35526 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.7■□□□□ 0.9
Stx1aO35526 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Stx1aO35526 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Stx1aO35526 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.7■□□□□ 0.9
Stx1aO35526 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Stx1aO35526 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Stx1aO35526 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.69■□□□□ 0.9
Stx1aO35526 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.69■□□□□ 0.9
Stx1aO35526 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.69■□□□□ 0.9
Stx1aO35526 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Stx1aO35526 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Stx1aO35526 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Stx1aO35526 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Stx1aO35526 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Stx1aO35526 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.68■□□□□ 0.9
Stx1aO35526 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stx1aO35526 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Stx1aO35526 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms