Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Gm13146-201ENSMUST00000118508 780 ntBASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfrsf11bO08712 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11bO08712 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11bO08712 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Tnfrsf11bO08712 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11bO08712 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11bO08712 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11bO08712 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfrsf11bO08712 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Tnfrsf11bO08712 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf11bO08712 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf11bO08712 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfrsf11bO08712 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11bO08712 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf11bO08712 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11bO08712 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11bO08712 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tnfrsf11bO08712 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11bO08712 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11bO08712 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfrsf11bO08712 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfrsf11bO08712 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfrsf11bO08712 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnfrsf11bO08712 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Gm13534-201ENSMUST00000121169 513 ntBASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Tnfrsf11bO08712 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnfrsf11bO08712 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms